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STRINGSTRING
101248696 protein (Solanum lycopersicum) - STRING interaction network
"101248696" - Protein of unknown function, DUF647 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101248696Protein of unknown function, DUF647 (606 aa)    
Predicted Functional Partners:
101265237
Protein of unknown function, DUF647 (429 aa)
       
 
0.884
101248427
annotation not available (393 aa)
           
  0.785
Solyc05g056590.2.1
Uncharacterized protein; Regulator of chromosome condensation (RCC1) family protein (275 aa)
           
  0.752
101253941
Uncharacterized protein; Regulator of chromosome condensation (RCC1) family protein (443 aa)
           
  0.751
Solyc05g018630.1.1
annotation not available (72 aa)
           
  0.679
Solyc05g018620.2.1
Uncharacterized protein; Regulator of chromosome condensation (RCC1) family protein (307 aa)
           
  0.679
Solyc07g042980.2.1
annotation not available (243 aa)
           
  0.648
Solyc07g042970.2.1
annotation not available (241 aa)
           
  0.648
101260510
annotation not available (400 aa)
           
  0.636
101268829
annotation not available (405 aa)
           
  0.636
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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