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NDPS1 protein (Solanum lycopersicum) - STRING interaction network
"NDPS1" - Dimethylallylcistransferase, chloroplastic in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDPS1Dimethylallylcistransferase, chloroplastic (305 aa)    
Predicted Functional Partners:
TPS41
Uncharacterized protein; TPS41 ; Belongs to the terpene synthase family (668 aa)
           
  0.803
PHS1
Beta-phellandrene synthase (neryl-diphosphate-cyclizing), chloroplastic; Monoterpene synthase catalyzing the production of beta- phellandrene from neryl diphosphate. Produces also lower amounts of delta-2-carene, alpha-phellandrene and limonene. When incubated in vitro with geranyl diphosphate, catalyzes the formation of acyclic myrcene and ocimene as major products in addition to beta- phellandrene (170 aa)
           
  0.803
101251011
annotation not available (506 aa)
           
  0.797
TPS21
Uncharacterized protein; Terpene synthase ; Belongs to the terpene synthase family (667 aa)
           
  0.797
Solyc09g031610.2.1
Uncharacterized protein; Damaged DNA binding 2 (587 aa)
           
  0.702
101249837
annotation not available (353 aa)
           
  0.621
Solyc06g060810.2.1
Uncharacterized protein; Undecaprenyl pyrophosphate synthetase family protein (236 aa)
     
 
  0.574
101055537
Hop-interacting protein THI138 (771 aa)
     
 
  0.574
Solyc06g064650.2.1
Uncharacterized protein; Hydroxysteroid dehydrogenase 5; Belongs to the short-chain dehydrogenases/reductases (SDR) family (322 aa)
           
  0.559
101257856
Uncharacterized protein; Nucleotide-diphospho-sugar transferases superfamily protein (238 aa)
   
 
  0.506
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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