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Solyc08g006540.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g006540.2.1" - Peptidylprolyl isomerase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
Solyc08g006540.2.1Peptidylprolyl isomerase; FK506-binding protein 13 (263 aa)    
Predicted Functional Partners:
101249229
Uncharacterized protein; Cyclophilin 38 (451 aa)
     
 
  0.982
VKOR
Vitamin K epoxide reductase; NAD(P)H dehydrogenase (quinone)s (373 aa)
     
 
  0.956
101263049
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (248 aa)
     
 
  0.943
101264410
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (233 aa)
     
   
  0.941
SPA
Protein SPA, chloroplastic; Participates in determining harvest index (HI) by affecting source-sink carbon distribution. Up-regulates the conversion of fixed carbon to exportable sugars (159 aa)
     
   
  0.935
101266364
Uncharacterized protein; NAD(P)H dehydrogenase 18 (216 aa)
     
   
  0.925
101247416
Uncharacterized protein; NDH-dependent cyclic electron flow 1 (463 aa)
     
   
  0.910
Solyc01g068190.2.1
Uncharacterized protein; High chlorophyll fluorescence 153 (88 aa)
     
   
  0.902
101266059
2Fe-2S ferredoxin-like superfamily protein (191 aa)
     
   
  0.887
101245163
Uncharacterized protein; PsbQ-like 2 (193 aa)
     
   
  0.885
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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