STRINGSTRING
Solyc08g006560.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g006560.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g006560.2.1Uncharacterized protein (381 aa)    
Predicted Functional Partners:
Solyc03g122120.2.1
Uncharacterized protein (558 aa)
 
 
  0.987
Solyc08g082620.2.1
Uncharacterized protein (485 aa)
 
 
  0.987
Solyc12g009260.1.1
3-oxoacyl-[acyl-carrier-protein] synthase (443 aa)
 
 
  0.986
Solyc02g070790.2.1
Uncharacterized protein (469 aa)
 
 
  0.986
Solyc08g016170.2.1
Uncharacterized protein (468 aa)
 
 
  0.986
Solyc07g049570.2.1
3-oxoacyl-[acyl-carrier-protein] synthase (465 aa)
 
 
  0.986
Solyc01g006980.2.1
Uncharacterized protein (359 aa)
 
 
  0.984
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
 
  0.983
Solyc01g008330.2.1
Uncharacterized protein (536 aa)
   
 
  0.954
Solyc06g069530.2.1
Uncharacterized protein (261 aa)
   
 
  0.951
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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