• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc08g006600.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g006600.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g006600.2.1annotation not available (755 aa)    
Predicted Functional Partners:
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
  0.806
Solyc09g065160.2.1
Uncharacterized protein; FZO-like (805 aa)
     
 
  0.644
101255974
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes (167 aa)
     
 
  0.567
101264999
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes (170 aa)
     
 
  0.567
Solyc10g079550.1.1
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes (172 aa)
     
 
  0.567
Solyc04g082560.2.1
Calcium-binding EF hand family protein (1228 aa)
     
 
  0.527
Solyc02g082540.2.1
annotation not available (1040 aa)
     
 
  0.527
Solyc02g082530.1.1
annotation not available (97 aa)
     
 
  0.527
Solyc00g007120.2.1
annotation not available (750 aa)
     
 
  0.527
Solyc00g007110.2.1
annotation not available (447 aa)
     
 
  0.527
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]