STRINGSTRING
Solyc08g006660.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g006660.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g006660.1.1Uncharacterized protein (742 aa)    
Predicted Functional Partners:
Solyc07g056010.2.1
Uncharacterized protein (736 aa)
     
  0.987
Solyc08g075440.2.1
Uncharacterized protein (691 aa)
     
  0.970
Solyc01g087650.2.1
Uncharacterized protein (576 aa)
     
  0.941
Solyc03g120700.2.1
Uncharacterized protein (1073 aa)
     
  0.937
Solyc04g008640.2.1
Uncharacterized protein (779 aa)
     
  0.936
Solyc07g017530.2.1
Uncharacterized protein (216 aa)
     
  0.935
Solyc07g017520.2.1
Uncharacterized protein (259 aa)
     
  0.935
Solyc05g006950.2.1
Embryo yellow protein (835 aa)
     
  0.931
Solyc10g007720.2.1
Uncharacterized protein (845 aa)
     
  0.930
Solyc04g081430.2.1
Uncharacterized protein (168 aa)
       
      0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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