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STRINGSTRING
Solyc08g007100.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g007100.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g007100.2.1annotation not available (362 aa)    
Predicted Functional Partners:
101258109
annotation not available (246 aa)
   
     
  0.782
101260254
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P; Belongs to the phosphohexose mutase family (558 aa)
   
 
  0.777
101265864
Uncharacterized protein; Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (250 aa)
   
   
  0.735
101257160
Uncharacterized protein; Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (317 aa)
   
     
  0.726
101245312
Alkaline-phosphatase-like family protein (968 aa)
   
   
  0.710
Solyc07g014610.2.1
Alkaline-phosphatase-like family protein (933 aa)
   
   
  0.710
101263344
Uncharacterized protein; Catalytics;hydrolases (345 aa)
           
  0.694
101268230
annotation not available (529 aa)
           
  0.568
LOC544042
Pathogenesis-related genes transcriptional activator PTI5; Acts as a transcriptional activator. Binds to the GCC- box pathogenesis-related promoter element. Activates plants defense genes. Can confer resistance to Pseudomonas syringae tomato by potentiating the transcription of a set of pathogenesis related genes, downstream to a defense signaling pathway involving PTO and PRF, but probably independent of ethylene, jasmonate and salicylic acid (161 aa)
           
  0.567
101264434
Uncharacterized protein; 3-phosphoserine phosphatase (295 aa)
         
  0.553
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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