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STRINGSTRING
101258879 protein (Solanum lycopersicum) - STRING interaction network
"101258879" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258879annotation not available (1264 aa)    
Predicted Functional Partners:
UPF2
annotation not available (769 aa)
     
  0.995
Solyc10g044450.1.1
annotation not available (481 aa)
     
  0.991
Solyc01g103420.2.1
annotation not available (496 aa)
     
  0.991
Solyc04g049770.2.1
annotation not available (423 aa)
     
 
  0.977
Solyc01g109080.2.1
annotation not available (3719 aa)
     
  0.967
101254445
Telomerase activating protein Est1 (987 aa)
     
 
  0.961
Solyc12g019960.1.1
annotation not available (597 aa)
     
 
  0.958
101244332
annotation not available (967 aa)
     
 
  0.958
101268456
Mago nashi family protein (151 aa)
     
 
  0.955
Y14
RNA-binding protein 8A; RNA-binding (RRM/RBD/RNP motifs) family protein (195 aa)
     
 
  0.955
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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