STRINGSTRING
Solyc08g007360.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g007360.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g007360.2.1Uncharacterized protein (1469 aa)    
Predicted Functional Partners:
Solyc03g120900.1.1
Uncharacterized protein (301 aa)
       
  0.914
Solyc02g087300.1.1
Uncharacterized protein (302 aa)
       
  0.914
Solyc01g088020.2.1
Uncharacterized protein (1124 aa)
     
 
  0.758
Solyc11g068500.1.1
Uncharacterized protein (742 aa)
     
  0.738
Solyc02g082220.2.1
Uncharacterized protein (1030 aa)
     
  0.738
Solyc11g056380.1.1
Uncharacterized protein (153 aa)
     
  0.721
Solyc11g032010.1.1
Uncharacterized protein (202 aa)
     
  0.721
Solyc09g092680.2.1
Uncharacterized protein (766 aa)
     
  0.721
Solyc09g055810.1.1
Uncharacterized protein (79 aa)
     
  0.721
Solyc05g053830.2.1
Uncharacterized protein (784 aa)
     
  0.721
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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