STRINGSTRING
Solyc08g007440.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g007440.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g007440.1.1Uncharacterized protein (303 aa)    
Predicted Functional Partners:
Solyc10g012160.2.1
Uncharacterized protein (331 aa)
   
 
  0.793
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
       
 
  0.785
Solyc02g083410.2.1
Uncharacterized protein (927 aa)
   
 
  0.755
Solyc11g005060.1.1
Uncharacterized protein (228 aa)
     
 
  0.656
Solyc07g032420.1.1
Uncharacterized protein (186 aa)
         
  0.652
Solyc04g077150.2.1
Uncharacterized protein (129 aa)
     
 
  0.631
Solyc04g015490.2.1
Mg-protoporphyrin IX chelatase ; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (766 aa)
   
   
  0.629
CRTISO
Prolycopene isomerase, chloroplastic ; Carotene cis-trans-isomerase that converts 7,9,9’-tri- cis-neurosporene to 9’-cis-neurosporene and 7,9,9’,7’-tetra-cis- lycopene (also known as prolycopene) into all-trans-lycopene. Isomerization requires redox-active components, suggesting that isomerization is achieved by a reversible redox reaction acting at specific double bonds. Isomerizes adjacent cis-double bonds at C7 and C9 pairwise into the trans-configuration, but is incapable of isomerizing single cis-double bonds at C9 and C9’ (615 aa)
   
 
  0.601
Solyc07g021640.1.1
Uncharacterized protein (147 aa)
   
 
  0.601
Solyc05g010180.2.1
Uncharacterized protein (568 aa)
   
 
  0.601
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]