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HMGS protein (Solanum lycopersicum) - STRING interaction network
"HMGS" - 3-hydroxy-3-methylglutaryl coenzyme A synthase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGS3-hydroxy-3-methylglutaryl coenzyme A synthase (462 aa)    
Predicted Functional Partners:
Solyc07g045350.2.1
Uncharacterized protein (404 aa)
   
  0.997
Solyc05g017760.2.1
Uncharacterized protein (407 aa)
   
  0.997
Solyc04g015100.2.1
Uncharacterized protein (411 aa)
   
  0.997
Solyc09g091470.2.1
Uncharacterized protein (465 aa)
   
  0.996
Solyc09g061840.2.1
Uncharacterized protein (456 aa)
   
  0.996
Solyc02g082260.2.1
HMGR CoA reductase (601 aa)
   
 
  0.981
HMG2
3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 ; Catalyzes the synthesis of mevalonate. The specific precursor of all isoprenoid compounds present in plants (620 aa)
   
 
  0.981
Solyc03g032020.2.1
3-hydroxy-3-methylglutaryl coenzyme A reductase (555 aa)
   
 
  0.979
Solyc03g032010.2.1
3-hydroxy-3-methylglutaryl coenzyme A reductase (503 aa)
   
 
  0.979
Solyc11g065070.1.1
Uncharacterized protein (430 aa)
         
  0.947
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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