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STRINGSTRING
Solyc08g008200.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g008200.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g008200.1.1annotation not available (759 aa)    
Predicted Functional Partners:
MHX
Magnesium/proton exchanger; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (540 aa)
           
  0.517
101255294
Uncharacterized protein; Quinolinate phoshoribosyltransferase (353 aa)
         
  0.509
Solyc06g050170.2.1
Potassium transporter; Potassium transporter (984 aa)
           
  0.504
101245180
annotation not available (555 aa)
     
 
  0.418
HKT1;2
Uncharacterized protein; High-affinity K+ transporter 1 (391 aa)
     
 
  0.418
NHX2
Sodium/hydrogen exchanger ; Belongs to the monovalent cation-proton antiporter 1 (CPA1) transporter (TC 2.A.36) family (531 aa)
     
 
  0.411
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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