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STRINGSTRING
Solyc08g008580.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g008580.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g008580.2.1annotation not available (447 aa)    
Predicted Functional Partners:
101264078
Uncharacterized protein; Ethylene-responsive methionine synthase (765 aa)
   
 
  0.959
101250617
Uncharacterized protein; Methionine synthase 3 (817 aa)
   
 
  0.959
101251816
Uncharacterized protein; Homocysteine S-methyltransferase 3 (338 aa)
   
 
  0.955
101262954
Uncharacterized protein; Homocysteine methyltransferase 2 (343 aa)
   
 
  0.955
SAM2
S-adenosylmethionine synthase 2; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme- formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate (393 aa)
     
  0.945
101245012
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (390 aa)
     
  0.945
SAM3
S-adenosylmethionine synthase 3; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme- formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate (390 aa)
     
  0.945
SAM1
S-adenosylmethionine synthase 1; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme- formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate (393 aa)
     
  0.945
101254347
annotation not available (543 aa)
   
  0.933
Solyc04g016010.2.1
annotation not available (537 aa)
   
  0.933
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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