STRINGSTRING
Solyc08g013670.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g013670.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g013670.2.1Uncharacterized protein (163 aa)    
Predicted Functional Partners:
Solyc02g069460.2.1
Uncharacterized protein (228 aa)
     
 
  0.966
Solyc02g069450.2.1
Uncharacterized protein (246 aa)
     
 
  0.966
Solyc07g066150.1.1
Uncharacterized protein (146 aa)
     
 
  0.946
Solyc06g069730.2.1
Chlorophyll a/b-binding protein (cab-12) (250 aa)
     
 
  0.942
Solyc12g011280.1.1
Uncharacterized protein (273 aa)
     
 
  0.885
CAB8
Chlorophyll a-b binding protein 8, chloroplastic ; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (273 aa)
     
 
  0.885
Solyc06g083680.2.1
Uncharacterized protein (138 aa)
     
 
  0.863
LyesC2p049
Photosystem I reaction center subunit IX ; May help in the organization of the PsaE and PsaF subunits (87 aa)
       
 
  0.857
psaD
Photosystem I reaction center subunit II, chloroplastic ; PsaD can form complexes with ferredoxin and ferredoxin- oxidoreductase in photosystem I (PS I) reaction center. PSAD may encode the ferredoxin-docking protein (208 aa)
     
 
  0.855
Solyc06g082950.2.1
Uncharacterized protein (220 aa)
     
 
  0.843
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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