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STRINGSTRING
Solyc08g013680.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g013680.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g013680.2.1annotation not available (111 aa)    
Predicted Functional Partners:
Solyc09g018730.2.1
annotation not available (315 aa)
     
        0.792
101253833
annotation not available (290 aa)
   
 
      0.717
101264469
annotation not available (294 aa)
   
 
      0.715
Solyc00g042130.1.1
annotation not available (704 aa)
     
   
  0.686
101245290
Uncharacterized protein; Lactoylglutathione lyase / glyoxalase I family protein (141 aa)
     
 
  0.675
101244821
annotation not available (763 aa)
         
  0.647
101249604
annotation not available (784 aa)
         
  0.647
101251530
annotation not available (339 aa)
   
   
  0.573
101244800
annotation not available (340 aa)
   
   
  0.573
Solyc02g069550.1.1
annotation not available (720 aa)
           
  0.560
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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