STRINGSTRING
Solyc08g014480.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g014480.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g014480.2.1Uncharacterized protein (1110 aa)    
Predicted Functional Partners:
Solyc06g062660.2.1
Beta-galactosidase (709 aa)
       
  0.941
Solyc03g118650.2.1
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (335 aa)
       
  0.932
Solyc03g113030.2.1
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (355 aa)
       
  0.932
Solyc02g087800.2.1
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (355 aa)
       
  0.932
Solyc02g087780.2.1
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (360 aa)
       
  0.932
HXK3
Hexokinase (499 aa)
         
  0.907
Solyc11g065220.1.1
Phosphotransferase (511 aa)
         
  0.907
Hxk2
Hexokinase (496 aa)
         
  0.907
HXK4
Plastidic hexokinase (499 aa)
         
  0.907
hxk1
Hexokinase (498 aa)
         
  0.907
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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