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STRINGSTRING
Solyc08g014530.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g014530.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g014530.1.1annotation not available (253 aa)    
Predicted Functional Partners:
101265669
Histone H2A 12 (145 aa)
           
  0.637
101259311
annotation not available (531 aa)
     
 
  0.475
101244313
Uncharacterized protein; Ankyrin-like1 (541 aa)
     
 
  0.475
101256495
annotation not available (535 aa)
     
 
  0.475
Solyc06g005240.2.1
annotation not available (450 aa)
     
 
  0.475
101247796
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (523 aa)
       
 
  0.472
Solyc08g077630.2.1
annotation not available (485 aa)
       
 
  0.472
101252910
annotation not available (409 aa)
       
 
  0.472
Solyc02g014320.1.1
annotation not available (229 aa)
       
 
  0.472
101248422
annotation not available (429 aa)
       
 
  0.472
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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