STRINGSTRING
Solyc08g015960.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g015960.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g015960.2.1Uncharacterized protein (287 aa)    
Predicted Functional Partners:
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
  0.992
Solyc01g102410.2.1
Uncharacterized protein (740 aa)
   
  0.977
Solyc05g009220.2.1
Uncharacterized protein (790 aa)
   
  0.974
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
   
0.974
Solyc10g007060.2.1
Uncharacterized protein (494 aa)
   
  0.969
Solyc02g090860.2.1
Uncharacterized protein (490 aa)
   
  0.969
Solyc02g061620.1.1
Uncharacterized protein (67 aa)
   
  0.969
Solyc01g081220.1.1
Uncharacterized protein (67 aa)
   
  0.969
Solyc05g054600.2.1
Uncharacterized protein (619 aa)
   
  0.967
Solyc11g012140.1.1
Uncharacterized protein (1182 aa)
   
  0.960
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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