STRINGSTRING
Solyc08g023280.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g023280.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g023280.2.1Uncharacterized protein (998 aa)    
Predicted Functional Partners:
Solyc02g050210.1.1
Uncharacterized protein (355 aa)
     
  0.561
Solyc02g050200.1.1
Uncharacterized protein (792 aa)
     
  0.561
Solyc07g042790.1.1
Uncharacterized protein (1452 aa)
     
  0.560
Solyc06g034070.1.1
Uncharacterized protein (1557 aa)
     
  0.560
Solyc10g079510.1.1
Uncharacterized protein (1243 aa)
     
  0.556
RTEL1
Regulator of telomere elongation helicase 1 (1040 aa)
     
  0.556
Solyc12g038200.1.1
Uncharacterized protein (519 aa)
     
  0.538
Solyc10g049480.1.1
Uncharacterized protein (461 aa)
     
  0.535
Solyc08g075840.2.1
Uncharacterized protein (899 aa)
     
  0.535
Solyc07g032800.1.1
Uncharacterized protein (228 aa)
     
  0.535
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]