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STRINGSTRING
Solyc08g023420.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g023420.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g023420.1.1annotation not available (178 aa)    
Predicted Functional Partners:
101262576
annotation not available (423 aa)
           
  0.625
101252788
Phospholipase A2 family protein (156 aa)
           
  0.521
101264463
annotation not available (555 aa)
           
  0.517
101250940
UDP-Glycosyltransferase superfamily protein (467 aa)
           
  0.471
Solyc03g007920.2.1
annotation not available (289 aa)
           
  0.463
101264492
annotation not available (328 aa)
           
  0.463
101248365
Glycolipid transfer protein (GLTP) family protein (206 aa)
     
   
  0.461
Solyc02g085070.1.1
annotation not available (363 aa)
           
  0.459
101268836
annotation not available (372 aa)
           
  0.459
101257836
annotation not available (292 aa)
           
  0.414
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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