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Solyc08g028690.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g028690.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g028690.2.1annotation not available (278 aa)    
Predicted Functional Partners:
101267455
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
     
   
  0.572
101266461
Thioesterase superfamily protein (225 aa)
   
 
  0.504
101252605
Uncharacterized protein; Ent-kaurene synthase ; Belongs to the terpene synthase family (819 aa)
     
   
  0.500
Solyc04g083160.1.1
Uncharacterized protein; GA requiring 3; Belongs to the cytochrome P450 family (510 aa)
     
 
  0.472
101253762
Uncharacterized protein; 15-cis-zeta-carotene isomerase (369 aa)
           
  0.437
101249116
Catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding (359 aa)
   
   
  0.418
101261158
Uncharacterized protein; Urophorphyrin methylase 1; Belongs to the precorrin methyltransferase family (376 aa)
           
  0.416
Solyc12g036510.1.1
annotation not available (236 aa)
   
          0.409
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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