STRINGSTRING
Solyc08g028870.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g028870.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g028870.1.1Uncharacterized protein (78 aa)    
Predicted Functional Partners:
Solyc00g042140.1.1
Annotation not available (399 aa)
   
  0.999
Solyc00g042130.1.1
Annotation not available (704 aa)
   
  0.999
atpB
ATP synthase subunit beta, chloroplastic ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (609 aa)
   
  0.996
Solyc01g017740.1.1
Uncharacterized protein (97 aa)
   
 
  0.987
Solyc12g039010.1.1
Cytochrome c oxidase subunit 2 ; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (538 aa)
   
   
  0.986
Solyc02g021370.1.1
Uncharacterized protein (395 aa)
   
   
  0.986
Solyc03g063780.1.1
Uncharacterized protein (111 aa)
     
   
  0.986
Solyc12g005060.1.1
Uncharacterized protein (349 aa)
   
  0.976
Solyc03g115110.2.1
Uncharacterized protein (324 aa)
   
  0.976
Solyc02g080540.1.1
Uncharacterized protein (377 aa)
   
  0.976
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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