STRINGSTRING
Solyc08g029110.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g029110.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g029110.2.1Uncharacterized protein (291 aa)    
Predicted Functional Partners:
Solyc02g079100.2.1
Uncharacterized protein (385 aa)
     
      0.734
Solyc04g008990.2.1
Uncharacterized protein (373 aa)
     
      0.607
Solyc11g006770.1.1
Uncharacterized protein (209 aa)
 
        0.589
Solyc01g098840.2.1
Uncharacterized protein (392 aa)
       
  0.521
Solyc04g005520.2.1
Uncharacterized protein (327 aa)
       
  0.457
Solyc12g062630.1.1
Uncharacterized protein (134 aa)
              0.424
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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