STRINGSTRING
Solyc08g036620.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g036620.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g036620.2.1Uncharacterized protein (103 aa)    
Predicted Functional Partners:
Solyc01g103600.2.1
Uncharacterized protein (129 aa)
       
 
  0.971
Solyc12g009220.1.1
Jasmonate ZIM-domain protein 1 (252 aa)
     
 
  0.970
Solyc06g068930.1.1
Uncharacterized protein (246 aa)
       
 
  0.958
Solyc03g118540.2.1
Uncharacterized protein (326 aa)
       
 
  0.958
Solyc01g005440.2.1
Jasmonate ZIM-domain protein 3 (309 aa)
       
 
  0.935
JA3
Transcription factor MYC2 (689 aa)
       
 
  0.929
Solyc07g042170.2.1
Uncharacterized protein (216 aa)
     
 
  0.911
Solyc01g096050.2.1
Uncharacterized protein (605 aa)
       
 
  0.899
Solyc05g050560.1.1
Uncharacterized protein (579 aa)
       
 
  0.625
Solyc02g067760.2.1
Uncharacterized protein (195 aa)
       
 
  0.505
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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