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STRINGSTRING
Solyc08g041850.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g041850.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g041850.2.1annotation not available (305 aa)    
Predicted Functional Partners:
101263925
Uncharacterized protein; Tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) (498 aa)
   
 
  0.957
101245475
annotation not available (441 aa)
         
  0.941
101257377
annotation not available (441 aa)
         
  0.941
101267644
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family (339 aa)
     
 
  0.917
101255662
annotation not available (338 aa)
     
 
  0.917
101248379
annotation not available (549 aa)
         
  0.912
101262299
Uncharacterized protein; Geranylgeranyl reductase (464 aa)
 
 
  0.908
101266160
annotation not available (451 aa)
 
 
  0.908
101263529
Uncharacterized protein; Homogentisate phytyltransferase 1 (402 aa)
   
   
0.904
SppS
Solanesyl diphosphate synthase ; Belongs to the FPP/GGPP synthase family (398 aa)
   
 
  0.848
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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