STRINGSTRING
Solyc08g041850.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g041850.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g041850.2.1Uncharacterized protein (305 aa)    
Predicted Functional Partners:
Solyc08g068570.2.1
Uncharacterized protein (498 aa)
   
   
  0.964
Solyc07g045050.2.1
4-hydroxyphenylpyruvate dioxygenase (441 aa)
         
  0.928
Solyc05g041200.2.1
4-hydroxyphenylpyruvate dioxygenase (441 aa)
         
  0.928
SppS
Solanesyl diphosphate synthase (398 aa)
   
 
  0.927
Solyc03g115980.1.1
Geranylgeranyl reductase (464 aa)
 
 
  0.925
Solyc01g088310.2.1
Uncharacterized protein (451 aa)
 
 
  0.925
Solyc03g051810.2.1
Uncharacterized protein (333 aa)
   
   
 
0.912
Solyc09g065730.2.1
Uncharacterized protein (339 aa)
     
 
  0.907
Solyc03g005230.2.1
Uncharacterized protein (338 aa)
     
 
  0.907
Solyc04g009600.2.1
Uncharacterized protein (549 aa)
         
  0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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