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Solyc08g042030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g042030.1.1" - ATP binding microtubule motor family protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g042030.1.1ATP binding microtubule motor family protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (700 aa)    
Predicted Functional Partners:
101256992
Dynamin related protein 5A; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (829 aa)
     
 
  0.758
101267403
Microtubule-associated protein 65-8 (595 aa)
     
 
  0.753
101246844
Ankyrin repeat family protein (250 aa)
     
 
  0.723
101249025
annotation not available (577 aa)
     
 
  0.716
Solyc01g104520.1.1
annotation not available (169 aa)
     
 
  0.716
Solyc11g013240.1.1
Putative protein kinase 1 (741 aa)
     
 
  0.710
101256940
annotation not available (1375 aa)
     
 
  0.689
101257469
DNA-binding HORMA family protein (208 aa)
     
 
  0.688
101263666
ARM repeat superfamily protein (2023 aa)
     
 
  0.622
101265455
ATP binding;protein kinases;protein serine/threonine kinases (529 aa)
     
 
  0.584
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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