STRINGSTRING
Solyc08g044250.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g044250.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g044250.1.1Uncharacterized protein (55 aa)    
Predicted Functional Partners:
Solyc12g088720.1.1
Polyadenylate-binding protein ; Binds the poly(A) tail of mRNA (666 aa)
       
  0.589
Solyc10g085750.1.1
Polyadenylate-binding protein ; Binds the poly(A) tail of mRNA (622 aa)
       
  0.589
Solyc09g008620.1.1
Polyadenylate-binding protein ; Binds the poly(A) tail of mRNA (605 aa)
       
  0.589
Solyc06g062680.1.1
Uncharacterized protein (531 aa)
       
  0.589
Solyc01g107870.2.1
Polyadenylate-binding protein ; Binds the poly(A) tail of mRNA (643 aa)
       
  0.589
Solyc00g009040.2.1
Annotation not available (649 aa)
       
  0.589
Solyc05g056110.2.1
Uncharacterized protein (321 aa)
         
  0.544
Solyc09g074090.2.1
Uncharacterized protein (325 aa)
         
  0.520
Solyc01g095480.2.1
Uncharacterized protein (243 aa)
         
  0.517
Solyc08g066700.2.1
Uncharacterized protein (232 aa)
         
  0.510
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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