STRINGSTRING
Solyc08g044270.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g044270.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g044270.2.1Uncharacterized protein (233 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
 
0.997
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
 
0.992
Solyc07g006530.2.1
Adenylosuccinase (546 aa)
     
 
  0.817
Solyc10g083850.1.1
Uncharacterized protein (833 aa)
   
 
  0.805
Solyc10g083830.1.1
Uncharacterized protein (613 aa)
   
 
  0.805
gdh1
Glutamate dehydrogenase (411 aa)
   
 
  0.803
Solyc06g033860.1.1
Glutamate dehydrogenase (411 aa)
   
 
  0.803
Solyc05g052100.2.1
Glutamate dehydrogenase (413 aa)
   
 
  0.803
Solyc03g094010.2.1
Glutamate dehydrogenase (411 aa)
   
 
  0.803
Solyc01g068210.2.1
Uncharacterized protein (634 aa)
   
 
  0.803
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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