STRINGSTRING
Solyc08g045720.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g045720.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g045720.1.1Uncharacterized protein (147 aa)    
Predicted Functional Partners:
Solyc09g011850.2.1
Uncharacterized protein (478 aa)
 
   
  0.634
FRK4
Fructokinase (375 aa)
 
   
  0.610
LOC543890
Fructokinase 3 (389 aa)
 
   
  0.610
Frk1
Fructokinase (347 aa)
 
   
  0.606
Solyc11g042850.1.1
Uncharacterized protein (325 aa)
       
  0.523
Solyc10g086190.1.1
Uncharacterized protein (339 aa)
       
  0.523
Solyc09g066130.2.1
Uncharacterized protein (476 aa)
       
  0.523
Solyc09g007940.2.1
Uncharacterized protein (340 aa)
       
  0.523
Solyc07g062070.2.1
Uncharacterized protein (376 aa)
       
  0.523
Solyc06g076950.2.1
Uncharacterized protein (377 aa)
       
  0.523
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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