STRINGSTRING
Solyc08g045740.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g045740.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g045740.1.1Uncharacterized protein (273 aa)    
Predicted Functional Partners:
Solyc12g099080.1.1
Uncharacterized protein (223 aa)
       
  0.520
Solyc10g049260.1.1
Uncharacterized protein (59 aa)
       
  0.520
Solyc09g055990.1.1
Uncharacterized protein (181 aa)
       
  0.520
Solyc07g006640.2.1
Uncharacterized protein (182 aa)
       
  0.520
Solyc06g072800.2.1
Uncharacterized protein (132 aa)
       
  0.520
Solyc05g005190.2.1
Uncharacterized protein (181 aa)
       
  0.520
Solyc04g025560.2.1
Uncharacterized protein (253 aa)
       
  0.520
Solyc03g096910.2.1
Uncharacterized protein (132 aa)
       
  0.520
Solyc03g005300.2.1
Uncharacterized protein (183 aa)
       
  0.520
Solyc02g092970.2.1
Uncharacterized protein (191 aa)
       
  0.520
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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