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STRINGSTRING
101248503 protein (Solanum lycopersicum) - STRING interaction network
"101248503" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101248503annotation not available (617 aa)    
Predicted Functional Partners:
101251384
Uncharacterized protein; Lactoylglutathione lyase / glyoxalase I family protein (161 aa)
           
  0.852
Solyc03g123840.2.1
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (320 aa)
       
      0.840
101246000
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1 (194 aa)
     
   
  0.770
101264445
annotation not available (151 aa)
     
 
  0.769
101243715
annotation not available (144 aa)
     
 
  0.769
cdc5
CDC5-like protein (987 aa)
     
      0.553
101259796
annotation not available (139 aa)
       
 
  0.415
101264752
annotation not available (139 aa)
       
 
  0.415
101251888
annotation not available (137 aa)
       
 
  0.415
101264416
annotation not available (143 aa)
       
 
  0.415
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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