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Solyc08g060930.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g060930.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g060930.2.1annotation not available (159 aa)    
Predicted Functional Partners:
Solyc07g064660.1.1
annotation not available (291 aa)
           
  0.555
101251730
annotation not available (373 aa)
           
  0.493
101253647
annotation not available (357 aa)
           
  0.493
101257910
annotation not available (489 aa)
           
  0.428
101251207
annotation not available (523 aa)
           
  0.428
101252577
Hexosyltransferase; Galacturonosyltransferase 4; Belongs to the glycosyltransferase 8 family (679 aa)
           
  0.428
101255136
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene) (189 aa)
           
  0.424
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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