STRINGSTRING
PGcat protein (Solanum lycopersicum) - STRING interaction network
"PGcat" - Polygalacturonase in Solanum lycopersicum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
PGcatPolygalacturonase (397 aa)    
Predicted Functional Partners:
GP2
Polygalacturonase non-catalytic subunit AroGP2 ; Non-catalytic subunit of polygalacturonase (629 aa)
           
  0.699
GP3
Polygalacturonase non-catalytic subunit AroGP3 ; Non-catalytic subunit of polygalacturonase (632 aa)
           
  0.698
GP1
Polygalacturonase-1 non-catalytic subunit beta ; Non-catalytic subunit of the polygalacturonase isozyme 1 (PG1). Necessary and sufficient to convert the polygalacturonase from its monomeric form PG2 to its heterodimeric form PG1. Seems to limit the depolymerization and solubilization of cell wall polyuronides mediated by PG2 during ripening, probably by recruiting PG2 to form PG1 (630 aa)
           
  0.691
Solyc12g099410.1.1
Pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (559 aa)
   
 
  0.542
Solyc05g054360.2.1
Pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (627 aa)
   
 
  0.542
Solyc01g099940.2.1
Pectinesterase (456 aa)
   
 
  0.542
Solyc01g066360.2.1
Pectinesterase (548 aa)
   
 
  0.542
Solyc12g099230.1.1
Pectinesterase (342 aa)
       
  0.529
Solyc12g098340.1.1
Pectinesterase (334 aa)
       
  0.529
Solyc12g008530.1.1
Pectinesterase (378 aa)
       
  0.529
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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