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STRINGSTRING
Solyc08g061570.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g061570.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g061570.1.1annotation not available (118 aa)    
Predicted Functional Partners:
101249509
Uncharacterized protein; Heavy metal atpase 1 (821 aa)
     
   
  0.740
CCS
Uncharacterized protein; Putative copper/zinc superoxide dismutase copper chaperone (311 aa)
     
 
  0.727
101268704
Cytochrome c biogenesis protein family (382 aa)
   
 
  0.640
101266793
annotation not available (351 aa)
   
   
  0.606
101252962
Uncharacterized protein; Heavy metal transport/detoxification superfamily protein (138 aa)
       
 
  0.556
Solyc02g083780.1.1
Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (997 aa)
     
      0.540
NR
Nitrate reductase [NADH]; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.538
101246346
Cytochrome c oxidase assembly protein CtaG / Cox11 family (287 aa)
     
   
  0.525
LOC544053
Plastocyanin, chloroplastic; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (170 aa)
   
   
  0.520
101264867
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (831 aa)
     
        0.501
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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