STRINGSTRING
Solyc08g061570.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g061570.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g061570.1.1Uncharacterized protein (118 aa)    
Predicted Functional Partners:
Solyc01g106090.2.1
Uncharacterized protein (287 aa)
   
          0.453
Solyc10g054420.1.1
Uncharacterized protein (227 aa)
   
          0.451
Solyc04g051120.2.1
Uncharacterized protein (274 aa)
   
          0.450
Solyc10g011770.2.1
Uncharacterized protein (169 aa)
   
          0.434
Solyc01g095430.2.1
Uncharacterized protein (170 aa)
   
          0.427
Solyc08g042140.2.1
Uncharacterized protein (305 aa)
   
          0.423
Solyc08g061580.2.1
Uncharacterized protein (135 aa)
   
          0.415
HrBP1
Harpin binding protein 1 (276 aa)
   
          0.413
Solyc02g090020.2.1
Uncharacterized protein (248 aa)
   
          0.401
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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