STRINGSTRING
Solyc08g061610.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g061610.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g061610.2.1Uncharacterized protein (894 aa)    
Predicted Functional Partners:
Solyc11g073020.1.1
Uncharacterized protein (258 aa)
     
  0.888
Solyc11g069070.1.1
Uncharacterized protein (353 aa)
     
  0.888
Solyc11g069060.1.1
Uncharacterized protein (221 aa)
     
  0.888
Solyc11g012690.1.1
Uncharacterized protein (219 aa)
     
  0.888
Solyc11g007200.1.1
Uncharacterized protein (113 aa)
     
  0.888
Solyc10g086280.1.1
Uncharacterized protein (327 aa)
     
  0.888
Solyc10g085910.1.1
Uncharacterized protein (297 aa)
     
  0.888
Solyc10g084000.1.1
Uncharacterized protein (361 aa)
     
  0.888
Solyc10g039390.1.1
Uncharacterized protein (214 aa)
     
  0.888
Solyc09g064730.2.1
Uncharacterized protein (158 aa)
     
  0.888
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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