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SlCKX3 protein (Solanum lycopersicum) - STRING interaction network
"SlCKX3" - Cytokinin oxidase/dehydrogenase 3 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SlCKX3Cytokinin oxidase/dehydrogenase 3 (531 aa)    
Predicted Functional Partners:
CycD3;2
CycD3;2 protein (364 aa)
           
  0.911
SlLOG6
Cytokinin riboside 5’-monophosphate phosphoribohydrolase LOG6; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (220 aa)
           
  0.822
cycD3
CycD3;1 protein; Cyclin D3.1 (359 aa)
           
  0.700
GLO2
Glycolate oxidase (371 aa)
   
 
  0.645
Solyc08g048250.2.1
Uncharacterized protein (379 aa)
   
 
  0.645
Solyc07g056540.2.1
Glycolate oxidase (371 aa)
   
 
  0.645
Solyc03g122170.2.1
Uncharacterized protein (343 aa)
   
 
  0.645
Solyc03g122160.1.1
Uncharacterized protein (104 aa)
   
 
  0.645
Solyc03g122150.2.1
Uncharacterized protein (153 aa)
   
 
  0.645
Solyc03g122140.2.1
Uncharacterized protein (363 aa)
   
 
  0.645
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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