STRINGSTRING
Solyc08g062490.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g062490.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g062490.2.1Uncharacterized protein (181 aa)    
Predicted Functional Partners:
Solyc11g066480.1.1
Uncharacterized protein (1064 aa)
           
  0.480
Solyc10g084650.1.1
Uncharacterized protein (1349 aa)
           
  0.480
Solyc10g083800.1.1
Uncharacterized protein (906 aa)
           
  0.480
Solyc09g008520.2.1
Uncharacterized protein (930 aa)
           
  0.480
Solyc08g066840.2.1
Uncharacterized protein (247 aa)
           
  0.480
Solyc07g054920.1.1
Uncharacterized protein (362 aa)
           
  0.480
Solyc03g111300.1.1
Uncharacterized protein (491 aa)
           
  0.480
Solyc03g111290.1.1
Uncharacterized protein (494 aa)
           
  0.480
Solyc03g111280.1.1
Uncharacterized protein (492 aa)
           
  0.480
Solyc03g080190.2.1
Flavonoid biosynthesis oxidoreductase protein (337 aa)
           
  0.480
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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