STRINGSTRING
Solyc08g062610.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g062610.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g062610.2.1Uncharacterized protein (355 aa)    
Predicted Functional Partners:
Solyc03g119700.2.1
Uncharacterized protein (159 aa)
       
 
  0.715
Solyc05g053950.2.1
Uncharacterized protein (319 aa)
 
          0.640
Solyc03g118830.2.1
Uncharacterized protein (304 aa)
 
        0.631
Solyc06g068970.2.1
Uncharacterized protein (287 aa)
 
        0.629
Solyc02g063390.2.1
Uncharacterized protein (318 aa)
 
        0.626
Solyc01g005320.2.1
Uncharacterized protein (322 aa)
 
        0.603
Solyc04g056440.1.1
Uncharacterized protein (210 aa)
   
          0.495
Solyc03g045140.2.1
Uncharacterized protein (815 aa)
 
   
0.443
Solyc09g090510.2.1
Uncharacterized protein (862 aa)
 
   
0.442
Solyc12g010320.1.1
Temperature-induced lipocalin (185 aa)
 
   
  0.428
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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