STRINGSTRING
Solyc08g062630.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g062630.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g062630.2.1Uncharacterized protein (875 aa)    
Predicted Functional Partners:
Solyc12g007100.1.1
Uncharacterized protein (483 aa)
   
 
  0.641
Solyc07g023990.1.1
Uncharacterized protein (416 aa)
   
      0.640
Solyc02g076720.2.1
Uncharacterized protein (1459 aa)
   
 
  0.579
Solyc01g107270.2.1
Uncharacterized protein (1333 aa)
   
 
  0.579
TFT2
14-3-3 protein 2 (254 aa)
     
  0.539
tft8
14-3-3 protein 8 (261 aa)
     
  0.539
TFT1
14-3-3 protein 1 (249 aa)
     
  0.539
TFT6
14-3-3 protein 6 (269 aa)
     
  0.539
tft9
14-3-3 protein 9 (261 aa)
     
  0.539
Solyc05g012420.2.1
Uncharacterized protein (285 aa)
     
  0.539
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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