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Solyc08g065870.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g065870.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g065870.2.1Uncharacterized protein (644 aa)    
Predicted Functional Partners:
PHYB1
Phytochrome B1 ; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose- bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reduc [...] (1131 aa)
       
  0.912
Solyc12g056650.1.1
Uncharacterized protein (1167 aa)
       
  0.908
Solyc04g071990.2.1
Uncharacterized protein (1167 aa)
       
  0.908
COP1
COP1 homolog (677 aa)
       
  0.887
LOC543596
Cryptochrome 2 (635 aa)
         
  0.857
LOC544219
Cryptochrome 1 (679 aa)
         
  0.857
Solyc11g011980.1.1
Uncharacterized protein (672 aa)
       
  0.846
PHYB2
Phytochrome ; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1121 aa)
       
  0.813
Cry1b
Cryptochrome 1b (583 aa)
         
  0.803
Solyc11g005190.1.1
COP1-like protein (360 aa)
         
    0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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