STRINGSTRING
Solyc08g065900.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g065900.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g065900.2.1Uncharacterized protein (252 aa)    
Predicted Functional Partners:
Solyc05g008430.2.1
Uncharacterized protein (888 aa)
     
  0.991
Solyc04g007560.2.1
Uncharacterized protein (908 aa)
     
  0.991
Solyc11g067240.1.1
Uncharacterized protein (432 aa)
     
  0.980
Solyc11g067230.1.1
Uncharacterized protein (432 aa)
     
  0.980
Solyc11g007170.1.1
Uncharacterized protein (404 aa)
     
  0.980
Solyc11g066260.1.1
Uncharacterized protein (220 aa)
     
  0.979
Solyc06g074840.2.1
Uncharacterized protein (222 aa)
     
  0.979
Solyc12g009060.1.1
Uncharacterized protein (223 aa)
     
  0.977
Solyc06g008290.2.1
Uncharacterized protein (88 aa)
     
  0.977
Solyc06g008280.2.1
Uncharacterized protein (99 aa)
     
  0.977
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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