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Solyc08g065990.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g065990.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g065990.2.1Uncharacterized protein (472 aa)    
Predicted Functional Partners:
NBP35
Cytosolic Fe-S cluster assembly factor NBP35 ; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development (353 aa)
     
  0.959
Solyc12g007010.1.1
Uncharacterized protein (535 aa)
     
  0.959
Solyc06g083990.2.1
Uncharacterized protein (296 aa)
     
  0.959
Solyc08g076120.2.1
Uncharacterized protein (70 aa)
     
  0.948
Solyc06g083060.2.1
Uncharacterized protein (136 aa)
     
  0.948
Solyc03g034050.2.1
Uncharacterized protein (70 aa)
     
  0.948
Solyc11g006910.1.1
Uncharacterized protein (125 aa)
       
 
  0.735
Solyc05g055280.1.1
Uncharacterized protein (98 aa)
       
 
  0.735
Solyc09g074400.2.1
Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog ; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins (351 aa)
       
  0.711
Solyc09g009410.2.1
Uncharacterized protein (348 aa)
       
  0.711
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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