STRINGSTRING
Solyc08g066010.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g066010.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g066010.2.1Uncharacterized protein (1529 aa)    
Predicted Functional Partners:
Solyc12g088090.1.1
Uncharacterized protein (222 aa)
       
  0.658
Solyc12g088080.1.1
Uncharacterized protein (97 aa)
       
  0.658
Solyc12g087830.1.1
Uncharacterized protein (198 aa)
       
  0.658
Solyc12g087820.1.1
Uncharacterized protein (106 aa)
       
  0.658
Solyc12g056460.1.1
Uncharacterized protein (206 aa)
       
  0.658
Solyc12g038510.1.1
MADS-box protein EBI (250 aa)
       
  0.658
Solyc12g017300.1.1
Uncharacterized protein (154 aa)
       
  0.658
Solyc12g016180.1.1
Uncharacterized protein (219 aa)
       
  0.658
Solyc12g016170.1.1
Uncharacterized protein (219 aa)
       
  0.658
Solyc12g016150.1.1
Uncharacterized protein (154 aa)
       
  0.658
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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