STRINGSTRING
Solyc08g066020.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g066020.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g066020.1.1Uncharacterized protein (511 aa)    
Predicted Functional Partners:
Solyc06g072320.2.1
Uncharacterized protein (489 aa)
 
0.968
Solyc03g098220.2.1
Uncharacterized protein (489 aa)
 
0.968
Solyc06g030590.1.1
Uncharacterized protein (430 aa)
 
0.967
Solyc06g054340.1.1
Uncharacterized protein (190 aa)
   
 
  0.948
Solyc10g018390.1.1
Uncharacterized protein (455 aa)
   
 
  0.822
Solyc10g006400.2.1
Uncharacterized protein (468 aa)
   
 
  0.822
Solyc10g005320.2.1
Uncharacterized protein (460 aa)
   
 
  0.822
Solyc07g064280.2.1
Uncharacterized protein (456 aa)
   
 
  0.822
Solyc12g098490.1.1
Serine hydroxymethyltransferase ; Interconversion of serine and glycine (471 aa)
       
  0.819
Solyc12g095930.1.1
Serine hydroxymethyltransferase ; Interconversion of serine and glycine (527 aa)
       
  0.819
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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