STRINGSTRING
Solyc08g066180.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g066180.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g066180.2.1Uncharacterized protein (587 aa)    
Predicted Functional Partners:
Solyc04g056540.2.1
Uncharacterized protein (603 aa)
       
    0.756
Solyc09g008130.2.1
Phosphoglycerate kinase (683 aa)
   
   
  0.746
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
   
   
  0.664
Solyc10g007950.2.1
Uncharacterized protein (857 aa)
         
  0.658
Solyc08g076650.2.1
Uncharacterized protein (862 aa)
         
  0.658
Solyc07g062140.2.1
Trehalose-phosphate synthase 1 (926 aa)
         
  0.658
Solyc07g055300.2.1
Uncharacterized protein (858 aa)
         
  0.658
TPS1
Trehalose-6-phosphate synthase (876 aa)
         
  0.658
Solyc05g005750.2.1
Uncharacterized protein (851 aa)
         
  0.658
Solyc04g025940.2.1
Uncharacterized protein (857 aa)
         
  0.658
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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