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STRINGSTRING
Solyc08g066330.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g066330.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g066330.1.1annotation not available (307 aa)    
Predicted Functional Partners:
101258564
annotation not available (532 aa)
     
 
  0.939
101258371
annotation not available (344 aa)
       
 
  0.938
Solyc04g077880.1.1
annotation not available (298 aa)
       
 
  0.937
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
 
  0.934
101267195
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
     
 
  0.934
101258279
Uncharacterized protein; Cyclin D6;1; Belongs to the cyclin family (310 aa)
       
 
  0.933
101264893
annotation not available (311 aa)
       
 
  0.933
101265894
annotation not available (297 aa)
       
 
  0.933
101256302
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (737 aa)
     
 
  0.924
101257469
DNA-binding HORMA family protein (208 aa)
     
 
  0.911
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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