STRINGSTRING
Solyc08g066640.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g066640.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g066640.2.1Uncharacterized protein (325 aa)    
Predicted Functional Partners:
Solyc08g082830.2.1
Uncharacterized protein (731 aa)
     
      0.600
Solyc08g079490.2.1
Uncharacterized protein (280 aa)
   
   
  0.597
Solyc08g007490.2.1
Uncharacterized protein (250 aa)
   
   
  0.597
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
        0.514
Solyc00g026870.1.1
Annotation not available (465 aa)
   
   
  0.494
Solyc01g106740.2.1
Uncharacterized protein (669 aa)
   
   
  0.470
Solyc00g030210.1.1
Annotation not available (1147 aa)
   
   
  0.465
Solyc07g048080.2.1
Uncharacterized protein (673 aa)
 
        0.454
Solyc01g067530.2.1
Uncharacterized protein (671 aa)
 
        0.438
Solyc04g080900.2.1
Uncharacterized protein (681 aa)
 
        0.409
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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