STRINGSTRING
Solyc08g066650.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g066650.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g066650.2.1Uncharacterized protein (557 aa)    
Predicted Functional Partners:
CCD7
Carotenoid cleavage dioxygenase 7 (663 aa)
   
 
0.937
Solyc08g062950.2.1
Uncharacterized protein (519 aa)
           
  0.546
Solyc12g010900.1.1
Uncharacterized protein (722 aa)
           
  0.538
Solyc07g055120.2.1
Uncharacterized protein (676 aa)
           
  0.538
Solyc09g065750.2.1
Uncharacterized protein (292 aa)
     
   
  0.519
Solyc08g066720.1.1
Uncharacterized protein (414 aa)
   
          0.486
Solyc05g010180.2.1
Uncharacterized protein (568 aa)
     
   
  0.407
Solyc11g007560.1.1
Uncharacterized protein (233 aa)
   
          0.404
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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