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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101254925 protein (Solanum lycopersicum) - STRING interaction network
"101254925" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101254925annotation not available (218 aa)    
Predicted Functional Partners:
Solyc10g078340.1.1
annotation not available (480 aa)
           
  0.554
Solyc09g061430.2.1
Uncharacterized protein; Putative nuclear GTPase (609 aa)
           
  0.524
101245772
annotation not available (605 aa)
           
  0.524
101249558
annotation not available (484 aa)
           
  0.434
Solyc03g117250.2.1
Hop-interacting protein THI116 (518 aa)
           
  0.434
101260111
annotation not available (489 aa)
           
  0.434
101253721
annotation not available (490 aa)
           
  0.434
Solyc01g107510.2.1
DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3’-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents (1045 aa)
           
  0.430
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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