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STRINGSTRING
Solyc08g066870.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g066870.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g066870.2.1annotation not available (382 aa)    
Predicted Functional Partners:
LOC543596
Cryptochrome 2 (635 aa)
       
 
  0.766
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
  0.713
LOC543862
Uncharacterized protein; Vacuolar H+-ATPase A2 subunit isoform (623 aa)
     
   
  0.700
101248497
annotation not available (559 aa)
     
   
  0.699
101257102
annotation not available (361 aa)
     
 
  0.697
101264888
annotation not available (309 aa)
     
      0.697
101248982
annotation not available (361 aa)
     
 
  0.606
GMP
GDP-mannose pyrophosphorylase (361 aa)
     
 
  0.606
LLP
LOV/LOV protein (398 aa)
           
  0.575
101255122
annotation not available (385 aa)
           
  0.575
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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